2003 F-250 SD. Moonroof wont fully close
 

So,
Long story short, the moonroof wont fully close. initially, it was stuck open, and the button would not engage. I could hear the motor working when I pushed the button to open it, but not closing. With some research, I found the allen wrench trick to manually close it without removing the headliner. I got excited, but it wont close it all the way, it stops about 3 inches short. Strange part is that now the button works fine to open and close it, just not fully! Frustrating as hell.

Is there a way to get this thing to close without ripping out the headliner or paying someone $2K to do it?